STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN2Tetraspanin. (223 aa)    
Predicted Functional Partners:
PTTG1
Securin.
      
 0.672
TRIM25
E3 ubiquitin/ISG15 ligase TRIM25.
      
 0.672
LIPT1
Lipoyltransferase 1, mitochondrial.
      
 0.671
VIPR1
Vasoactive intestinal polypeptide receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.642
PTGS1
Prostaglandin G/H synthase 1.
      
 0.588
TSPAN7
Tetraspanin.
   
  
0.564
GDF15
Growth differentiation factor 15.
    
 0.528
TSPAN9
Tetraspanin.
      
0.527
TSPAN10
Tetraspanin.
      
0.525
TSPAN4
Tetraspanin.
      
0.524
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.