Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CALHM6Calcium homeostasis modulator protein 6. (316 aa)    
Predicted Functional Partners:
VCL
Vinculin.
      
 0.565
HAND1
Heart-and neural crest derivatives-expressed protein 1.
      
 0.565
C1orf109
Uncharacterized protein C1orf109.
   
    0.505
RUBCNL
Uncharacterized protein KIAA0226-like.
   
    0.502
CWC25
Pre-mRNA-splicing factor CWC25.
   
    0.501
HAND2
Heart-and neural crest derivatives-expressed protein 2.
      
 0.488
FBXO47
F-box only protein 47.
   
    0.482
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]
   
    0.467
ERC2
ERC protein 2.
      
 0.431
EPSTI1
Epithelial stromal interaction 1.
   
  
 0.429
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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