Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC12A9Solute carrier family 12 member 9. (882 aa)    
Predicted Functional Partners:
SRRT_0
Serrate RNA effector molecule.
      
 0.697
MAP3K7CL
MAP3K7 C-terminal-like protein.
    
 0.607
PASK
PAS domain-containing serine/threonine-protein kinase.
    
 0.591
TM7SF3
Transmembrane 7 superfamily member 3.
      
 0.584
LOC110481008
Calsyntenin-2.
      
 0.567
LPP
Lipoma-preferred partner.
      
 0.558
MECR
Trans-2-enoyl-CoA reductase, mitochondrial.
      
 0.536
C5orf51
UPF0600 protein C5orf51 homolog isoform X1.
      
 0.536
ADK
Adenosine kinase.
    
 
 0.473
EPHB1
Ephrin type-B receptor 1.
   
 0.452
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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