STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR1Myotubularin-related protein 1. (643 aa)    
Predicted Functional Partners:
FIG4
Polyphosphoinositide phosphatase.
     
 0.933
PIKFYVE
1-phosphatidylinositol 3-phosphate 5-kinase.
     
 0.916
SACM1L
Phosphatidylinositide phosphatase SAC1.
   
 
 0.915
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase.
   
 
 0.913
INPP4B
Type II inositol 3,4-bisphosphate 4-phosphatase.
   
 
 0.912
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
    
 0.906
PIP4P2
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.901
PIP4P1
Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.
     
 0.901
INPP5F
Phosphatidylinositide phosphatase SAC2.
     
 0.900
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
     
 0.768
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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