STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110473085Bile acid receptor. (462 aa)    
Predicted Functional Partners:
PPARGC1A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha.
    
 0.785
NCOR2
Nuclear receptor corepressor 2.
    
 0.778
NCOR1
Nuclear receptor corepressor 1.
    
 0.778
RXRA
Retinoic acid receptor RXR-alpha.
   
 0.767
RXRG
Retinoic acid receptor RXR-gamma.
   
 0.767
RXRB
Retinoic acid receptor RXR-alpha-B.
   
 0.767
NCOA3
Nuclear receptor coactivator 3.
    
 0.766
NCOA1_1
Nuclear receptor coactivator 1.
    
 0.766
NCOA2
Nuclear receptor coactivator.
    
 0.766
FABP6
Gastrotropin.
   
 0.749
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.