Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTNNA2Catenin alpha 2. (674 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
   
 0.985
VCL
Vinculin.
   
0.981
AFDN
Afadin.
   
 0.970
TJP1
Tight junction protein ZO-1; Belongs to the MAGUK family.
   
 0.942
ACTN1
Alpha-actinin-1.
   
 0.926
ACTG1
Actin, cytoplasmic 2.
    
 0.923
ACTB
Actin, cytoplasmic 1.
    
 0.923
LOC110479753
Actin, cytoplasmic type 5.
    
 0.923
CTNNA3
Catenin alpha-3.
  
  
 
0.902
CTNNA2-2
Catenin alpha-2 isoform X1.
 
     0.901
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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