Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SIKE1Suppressor of IKBKE 1. (203 aa)    
Predicted Functional Partners:
SLMAP
Sarcolemmal membrane-associated protein.
    
 
 0.899
PDCD10
Programmed cell death protein 10.
   
 
 0.885
STK26
Serine/threonine-protein kinase 26.
    
 
 0.863
TRAF3IP3
TRAF3-interacting JNK-activating modulator.
    
 
 0.849
LOC110484605
MOB-like protein phocein.
    
 
 0.826
RNF8
E3 ubiquitin-protein ligase RNF8.
    
 
 0.752
STRIP2
Striatin-interacting protein 2.
    
 
 0.733
STRIP1
Striatin-interacting protein 1.
    
 
 0.733
MAP4K4
Mitogen-activated protein kinase kinase kinase kinase 4.
    
 
 0.727
CDT1
DNA replication factor Cdt1.
    
   0.715
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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