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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIKE1Suppressor of IKBKE 1. (203 aa)    
Predicted Functional Partners:
PDCD10
Programmed cell death protein 10.
    
 
 0.895
TRAF3IP3
TRAF3-interacting JNK-activating modulator.
    
 
 0.865
SLMAP
Sarcolemmal membrane-associated protein.
    
 
 0.800
LOC110484605
MOB-like protein phocein.
    
 
 0.756
STRIP2
Striatin-interacting protein 2.
    
 
 0.664
STRIP1
Striatin-interacting protein 1.
    
 
 0.664
STRN3
Striatin-3.
    
 
 0.659
STRN
Striatin.
    
 
 0.659
WDR64
WD repeat-containing protein 64.
    
 
 0.605
STK25
Serine/threonine-protein kinase 25.
    
 
 0.597
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.