STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPBGLTrophoblast glycoprotein-like. (351 aa)    
Predicted Functional Partners:
LRRC3
Leucine-rich repeat-containing protein 3.
    
 0.603
METTL27
Williams-Beuren syndrome chromosomal region 27 protein.
    
 
 0.578
ENSLSDP00000003385
annotation not available
      
 0.568
OPLAH
5-oxoprolinase, ATP-hydrolysing.
      
 0.568
ATP10B
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.566
SFRP2
Secreted frizzled-related protein 2.
    
 
 0.565
LAMP5
Lysosome-associated membrane glycoprotein 5.
      
 0.563
TSKU
Tsukushin.
      
 0.533
IQCD
IQ domain-containing protein D.
    
 
 0.512
NTNG1
Netrin-G1.
    
 0.510
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.