STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTM1Myotubularin. (603 aa)    
Predicted Functional Partners:
FIG4
Polyphosphoinositide phosphatase.
     
 0.941
PIKFYVE
1-phosphatidylinositol 3-phosphate 5-kinase.
     
 0.931
SACM1L
Phosphatidylinositide phosphatase SAC1.
   
 
 0.924
LOC110480024
CDP-diacylglycerol--inositol 3-phosphatidyltransferase-like.
     
 0.916
INPP4B
Type II inositol 3,4-bisphosphate 4-phosphatase.
     
 0.914
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase.
     
 0.914
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
     
 0.912
PLCB1
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
     
 0.912
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
    
 0.910
PIP4P1
Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.
     
 0.908
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.