STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110480403Protein kinase C epsilon type. (554 aa)    
Predicted Functional Partners:
BRAF
Serine/threonine-protein kinase B-raf.
    
 0.930
NRAS
GTPase NRas.
    
 0.928
KRAS
GTPase KRas.
    
 0.928
HRAS
GTPase HRas.
    
 0.928
MSN
Moesin.
   
  0.925
RDX
Radixin.
   
  0.925
EZR
Ezrin.
   
  0.925
RAF1
RAF proto-oncogene serine/threonine-protein kinase.
    
  0.918
RRAS2
Ras-related protein R-Ras2.
   
 0.918
MRAS
Ras-related protein M-Ras.
   
 0.916
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.