STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCH1Phosphoinositide phospholipase C. (1010 aa)    
Predicted Functional Partners:
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
    
 0.925
PTEN
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
     
 0.901
MINPP1
Multiple inositol polyphosphate phosphatase 1; Belongs to the histidine acid phosphatase family.
     
  0.900
PIP5K1B
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta.
   
 0.749
PIP5K1C
Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma.
   
 0.741
PIP5K1A
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
   
 0.741
LOC110476114
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1-like.
 
      0.728
INPP5A
Type I inositol 1,4,5-trisphosphate 5-phosphatase.
     
 0.704
INPP5J
Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A.
     
 0.670
INPP5K
Inositol polyphosphate 5-phosphatase K.
     
 0.670
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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