STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC33A1Acetyl-coenzyme A transporter 1. (531 aa)    
Predicted Functional Partners:
ST8SIA1
Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase; Belongs to the glycosyltransferase 29 family.
     
  0.900
ST8SIA5
Alpha-2,8-sialyltransferase 8E; Belongs to the glycosyltransferase 29 family.
     
  0.900
AK9
Adenylate kinase 9.
      
 0.661
DNAJB9
DnaJ subfamily B member 9.
   
   0.573
TAT
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
  
 0.545
AMD1
S-adenosylmethionine decarboxylase proenzyme.
    
 
 0.542
MFSD11
UNC93-like protein MFSD11.
      
 0.499
PC
Uncharacterized protein.
      
 0.485
NIPA1
Magnesium transporter NIPA1.
   
  
 0.463
SLC30A5
Zinc transporter 5.
   
  
 0.428
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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