STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Zinc transporter ZIP3. (340 aa)    
Predicted Functional Partners:
SAMM50
Sorting and assembly machinery component 50.
    
 
 0.760
MTX3
Metaxin.
    
 
 0.629
MTX1
Metaxin.
    
 
 0.629
TOMM40L
Mitochondrial import receptor subunit TOM40B.
   
 
 0.623
SLC39A11
Zinc transporter ZIP11.
   
 0.583
TIMM13
Mitochondrial import inner membrane translocase subunit Tim13-A; Belongs to the small Tim family.
   
 
 0.524
SLC39A9
Zinc transporter ZIP9.
    
 
 0.510
SLC39A13
Zinc transporter ZIP13.
   
 0.482
TOMM7
Mitochondrial import receptor subunit TOM7.
    
 
 0.474
SLC30A9
Zinc transporter 9.
   
  
 0.470
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.