Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FBXL22F-box and leucine-rich protein 22. (226 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.623
PLEK2
Pleckstrin-2.
      
 0.568
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.535
MVB12B
Multivesicular body subunit 12B.
      
 0.517
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.499
RNF7
RING-box protein 2 isoform X1.
    
 0.499
SVIL
Supervillin.
      
 0.496
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.461
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.461
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.439
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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