Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IDSIduronate 2-sulfatase. (524 aa)    
Predicted Functional Partners:
IDUA
Alpha-L-iduronidase.
     
 0.968
SUMF1
Sulfatase-modifying factor 1.
  
 0.919
HPSE2
Inactive heparanase-2.
     
  0.900
HPSE
Heparanase.
     
  0.900
GUSB
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
   
 
 0.744
GNS
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
  
 0.712
TXNDC9
Thioredoxin domain-containing protein 9.
     
 0.689
MRPL30
39S ribosomal protein L30, mitochondrial.
      
 0.682
MITD1
MIT domain-containing protein 1.
      
 0.666
SGSH
N-sulfoglucosamine sulfohydrolase.
  
 
 
0.617
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.