STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIRAS1DIRAS family, GTP-binding Ras-like 1. (197 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2.
    
 0.859
ITSN1
Intersectin-1.
    
 0.759
PIK3CB
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family.
    
 0.706
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.698
RAF1
RAF proto-oncogene serine/threonine-protein kinase.
   
 0.633
BRAF
Serine/threonine-protein kinase B-raf.
   
 0.633
RASGRP3
Ras guanyl-releasing protein 3.
    
 0.593
RASGRP1
RAS guanyl-releasing protein 1.
    
 0.593
MET
Hepatocyte growth factor receptor.
   
 0.589
MST1R
Macrophage-stimulating protein receptor.
   
 0.589
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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