STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIRAS1DIRAS family, GTP-binding Ras-like 1. (197 aa)    
Predicted Functional Partners:
PIK3CB
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family.
    
 0.767
RAPGEF4
Rap guanine nucleotide exchange factor 4.
   
 0.764
LRRC17
Leucine-rich repeat-containing protein 17.
    
 0.689
RARRES2
Retinoic acid receptor responder protein 2.
      
 0.668
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 0.655
RAF1
RAF proto-oncogene serine/threonine-protein kinase.
    
 0.609
BRAF
Serine/threonine-protein kinase B-raf.
    
 0.609
ITSN2
Intersectin-2.
    
 0.605
NKX1-1
NK1 transcription factor-related protein 1.
      
 0.589
LCAT
Phosphatidylcholine-sterol acyltransferase.
      
 0.589
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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