Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
SAP130Histone deacetylase complex subunit SAP130. (1059 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interactive domain-containing protein 4B.
    
 0.962
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3.
   
 0.952
ING2
Inhibitor of growth protein.
    
 
 0.928
SINHCAF
SIN3-HDAC complex-associated factor.
    
 
 0.925
SIN3B
Paired amphipathic helix protein Sin3b.
   
 0.917
SIN3A
Paired amphipathic helix protein Sin3a.
   
 0.917
SAP30
Histone deacetylase complex subunit SAP30.
    
 0.862
SAP30L
Histone deacetylase complex subunit SAP30L-B.
    
 0.862
ZNF704
Zinc finger protein 704.
    
   0.846
MXD1
MAX dimerization protein 1.
    
   0.845
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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