STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMOXSpermine oxidase. (535 aa)    
Predicted Functional Partners:
SMS
Spermine synthase.
     
 0.966
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.966
LOC110471837
Amine oxidase.
     
 0.922
ALDH7A1
Alpha-aminoadipic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.905
LOC110485004
Aldehyde dehydrogenase family 3 member B1.
     
 0.903
ALDH9A1
4-trimethylaminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
ALDH2
Aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
     
  0.900
AMD1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.873
HAO1
Hydroxyacid oxidase 1.
     
 0.726
SLC22A16
Solute carrier family 22 member 16.
     
 0.693
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.