STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF24RING finger protein 24. (365 aa)    
Predicted Functional Partners:
CLRN3
Clarin-3.
      
 0.730
UBOX5
RING finger protein 37.
     
 0.702
KCTD9
BTB/POZ domain-containing protein KCTD9.
      
 0.701
APMAP
Adipocyte plasma membrane-associated protein.
      
 0.599
ZNF711
Zinc finger protein 711.
      
 0.595
CDH22
Cadherin-22; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.592
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
      
 0.592
RWDD1
RWD domain-containing protein 1.
      
 0.572
PPP1R16B
Protein phosphatase 1 regulatory inhibitor subunit 16B.
      
 0.567
MBIP
MAP3K12-binding inhibitory protein 1.
      
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.