STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LANCL1LanC-like protein 1. (400 aa)    
Predicted Functional Partners:
GSR
Glutathione reductase, mitochondrial.
    
  0.902
PRDX6
Peroxiredoxin-6.
     
  0.900
TXNDC12
Thioredoxin domain-containing protein 12.
     
  0.900
GPX4-2
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.900
GSS
Glutathione synthetase.
     
  0.900
DERA
Deoxyribose-phosphate aldolase.
    
   0.839
MAPT
Microtubule associated protein tau.
    
   0.835
NRBP2
Nuclear receptor-binding protein 2.
    
   0.718
STYXL1
Serine/threonine/tyrosine-interacting-like protein 1.
      
 0.686
SMYD4
SET and MYND domain-containing protein 4.
      
 0.681
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.