Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PANK2Pantothenate kinase 2, mitochondrial isoform X1. (378 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
   
   0.837
PPCS
Phosphopantothenate--cysteine ligase.
     
 0.663
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
    
 
 0.641
WDR90
WD repeat-containing protein 90.
    
   0.631
CCDC65
Coiled-coil domain-containing protein 65.
   
 
 0.578
COASY
Bifunctional coenzyme A synthase.
      
 0.557
IQCG
IQ domain-containing protein G.
    
 
 0.533
CFAP43
Cilia-and flagella-associated protein 43.
   
 
 0.521
CFAP44
Cilia-and flagella-associated protein 44.
   
   0.514
PPCDC
Phosphopantothenoylcysteine decarboxylase.
     
 0.512
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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