STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYL1Myosin light chain 1, skeletal muscle isoform. (192 aa)    
Predicted Functional Partners:
LOC110480025
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 0.980
NEB
Nebulin.
   
 
 0.957
TNNC2
Troponin C, skeletal muscle.
  
0.935
TNNI2
Troponin I, fast skeletal muscle.
   
 0.917
ENSLSDP00000004841
annotation not available
   
 0.890
TNNI1
Troponin I, slow skeletal muscle.
   
 0.890
MYL9
Myosin regulatory light polypeptide 9.
   
0.878
LOC110467854
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
0.878
LOC110467855
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
0.878
SMIM20
Small integral membrane protein 20.
   
 0.869
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.