Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RWDD1RWD domain-containing protein 1. (240 aa)    
Predicted Functional Partners:
DRG2
Developmentally-regulated GTP-binding protein 2.
   
 0.997
DRG1
Developmentally-regulated GTP-binding protein 1.
   
 0.973
GCN1
Translational activator GCN1.
    
 
 0.921
DENR
Density-regulated protein.
   
    0.846
RWDD2A
RWD domain-containing protein 2A.
      
 0.820
ESF1
ESF1.
   
   0.781
JMJD7
Bifunctional peptidase and (3S)-lysyl hydroxylase JMJD7.
     
 0.781
ZC3H15
Zinc finger CCCH domain-containing protein 15.
   
 
 0.720
HSPA14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
   
   0.603
PPP1R16B
Protein phosphatase 1 regulatory inhibitor subunit 16B.
      
 0.592
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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