STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RWDD1RWD domain-containing protein 1. (240 aa)    
Predicted Functional Partners:
DRG2
Developmentally-regulated GTP-binding protein 2.
   
 
 0.991
DRG1
Developmentally-regulated GTP-binding protein 1.
   
 
 0.945
GCN1
Translational activator GCN1.
    
 
 0.818
ZC3H15
Zinc finger CCCH domain-containing protein 15.
   
 
 0.785
DENR
Density-regulated protein.
   
    0.777
ABCF3
ATP-binding cassette sub-family F member 3.
   
  
 0.609
RWDD2A
RWD domain-containing protein 2A.
      
 0.595
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
   
  
 0.576
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
  
 0.535
MAP3K4
Mitogen-activated protein kinase kinase kinase 4.
    
   0.529
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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