STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1 subunit A. (689 aa)    
Predicted Functional Partners:
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 
 0.963
ASF1A
Histone chaperone ASF1.
   
 
 0.873
MCM5
DNA helicase; Belongs to the MCM family.
   
  
 0.823
RBBP7
Histone-binding protein RBBP7.
   
 
 0.788
RBBP4
Histone-binding protein RBBP4.
   
 
 0.788
MCM2
DNA helicase; Belongs to the MCM family.
   
 
 0.781
MCM3
DNA helicase; Belongs to the MCM family.
   
  
 0.777
POLA1
DNA polymerase.
   
 
 0.746
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.732
MCM4
DNA helicase; Belongs to the MCM family.
   
 
 0.712
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.