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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND2CDENN domain-containing protein 2C. (921 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35.
    
 0.707
IFT27
Intraflagellar transport protein 27.
    
 0.707
SUOX
Sulfite oxidase.
      
 0.632
C3orf67
Uncharacterized protein C3orf67 homolog isoform X2.
      
 0.579
RHOBTB3
Rho-related BTB domain-containing protein 3.
      
 0.552
RAB9A
Ras-related protein Rab-9A.
     
 0.533
RAB9B
Ras-related protein Rab-9B.
     
 0.533
ITSN2
Intersectin-2.
    
 
 0.492
LOC110471134
Rab proteins geranylgeranyltransferase component A 2.
   
 
  0.428
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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