STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDGFL2Hepatoma-derived growth factor-related protein 2. (642 aa)    
Predicted Functional Partners:
POGZ
Pogo transposable element with ZNF domain.
    
 
 0.738
ENSLSDP00000008430
annotation not available
    
 
 0.738
HDGF
Hepatoma-derived growth factor.
   
 
 0.679
POLDIP3
Polymerase delta-interacting protein 3.
   
 
 0.593
MRPL15
39S ribosomal protein L15, mitochondrial.
      
 0.568
ZNF516
Zinc finger protein 516.
    
 
 0.567
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
      
 0.565
TSPAN8
Tetraspanin 8.
      
 0.565
ENSLSDP00000002598
Histone H3.3.
    
   0.503
ENSLSDP00000002618
annotation not available
    
   0.503
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.