Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LMLNLeishmanolysin-like peptidase. (635 aa)    
Predicted Functional Partners:
GPR65
Psychosine receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.671
PIK3CB
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family.
      
 0.664
HEG1
Protein HEG 1.
    
 
 0.663
C9orf72
Protein C9orf72.
    
 
 0.622
ENSLSDP00000025491
annotation not available
    
 
 0.622
SLC12A8
Solute carrier family 12 member 8.
      
 0.582
ELF2
ETS-related transcription factor Elf-2.
      
 0.573
IQCG
IQ domain-containing protein G.
      
 0.566
ABHD2
Abhydrolase domain-containing protein 2.
   
  
 0.553
DDIT4
DNA damage-inducible transcript 4 protein.
      
 0.544
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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