STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB2Transmembrane and ubiquitin-like domain-containing protein 2. (304 aa)    
Predicted Functional Partners:
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
    
   0.855
TMEM259
Membralin.
    
 
 0.789
ERLIN2
Erlin-2.
    
 
 0.711
ERLIN1
Erlin-1.
    
 
 0.711
RNF185
E3 ubiquitin-protein ligase RNF185.
    
 
 0.675
C6orf120
UPF0669 protein C6orf120.
      
 0.671
RNF170
E3 ubiquitin-protein ligase RNF170.
    
 
 0.662
HERPUD2
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein.
      
 0.575
TMEM53
Transmembrane protein 53-B.
   
  
 0.570
ZNF346
Zinc finger protein 346.
      
 0.569
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.