STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK2SLIT and NTRK-like protein 2. (856 aa)    
Predicted Functional Partners:
PTPRS
Receptor-type tyrosine-protein phosphatase S.
    
 0.689
PTPRD
Receptor-type tyrosine-protein phosphatase delta.
    
 0.632
IL1RAPL2
X-linked interleukin-1 receptor accessory protein-like 2.
   
 0.627
PTPRF
Receptor-type tyrosine-protein phosphatase F.
    
 0.608
TMEM94
Uncharacterized protein KIAA0195.
      
 0.564
MAP2K3
Dual specificity mitogen-activated protein kinase kinase 3 isoform X1.
      
 0.481
MAP2K6
Dual specificity mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
      
 0.481
GPR158
Putative G-protein coupled receptor 158.
   
  
 0.471
IL1RAPL1
Interleukin-1 receptor accessory protein-like 1.
   
 0.466
SLC6A1
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
    0.459
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.