Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFATZinc finger protein ZFAT. (1234 aa)    
Predicted Functional Partners:
IGFBP2
Insulin-like growth factor-binding protein 2.
      
 0.850
NCAPG
Condensin complex subunit 3.
      
 0.722
EGF
Pro-epidermal growth factor.
     
 0.704
GHSR
Growth hormone secretagogue receptor type 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.692
MAGI2
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.
      
 0.688
PCSK9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
      
 0.683
STK11
Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily.
    
 0.589
ADTRP
Androgen-dependent TFPI-regulating protein.
      
 0.583
HMGA2
High mobility group protein HMGI-C.
      
 0.578
BLCAP
Bladder cancer-associated protein.
      
 0.561
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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