Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
SLITRK4SLIT and NTRK-like protein 4. (837 aa)    
Predicted Functional Partners:
GBE1
1,4-alpha-glucan-branching enzyme.
     
 0.706
HTR1F
5-hydroxytryptamine receptor 1F.
      
 0.625
SEMA4G
Semaphorin-4G; Belongs to the semaphorin family.
      
 0.547
HTR1E
5-hydroxytryptamine receptor 1E.
      
 0.494
DRD3
D(3) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.472
CAPN7
Calpain-7; Belongs to the peptidase C2 family.
    
 
 0.453
VMA21
Vacuolar ATPase assembly integral membrane protein vma21.
      
 0.447
PCDH12
Protocadherin-12.
     
 0.439
SYTL5
Synaptotagmin-like protein 5.
      
 0.437
TMEM47
Transmembrane protein 47.
      
 0.420
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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