STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110477888Perilipin; Belongs to the perilipin family. (583 aa)    
Predicted Functional Partners:
ABHD5
1-acylglycerol-3-phosphate O-acyltransferase ABHD5.
   
 0.603
AP2M1
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
  0.569
AP2A2
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.520
IGF2R
Cation-independent mannose-6-phosphate receptor.
   
 0.511
RHOBTB3
Rho-related BTB domain-containing protein 3.
    
 0.496
GAK
Cyclin-G-associated kinase.
    
 0.446
M6PR
Cation-dependent mannose-6-phosphate receptor.
   
 0.442
VAMP3
Vesicle-associated membrane protein 3.
   
  0.432
WDR90
WD repeat-containing protein 90.
    
 0.428
RABEPK
Rab9 effector protein with kelch motifs.
    
  0.425
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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