STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL11Oxysterol-binding protein; Belongs to the OSBP family. (706 aa)    
Predicted Functional Partners:
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
    
  
0.650
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.587
RHOH
Rho-related GTP-binding protein RhoH.
    
  0.452
RAB7A
Ras-related protein Rab-7a.
    
  0.445
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 
 0.436
TFRC
Transferrin receptor protein 1.
   
 
  0.422
VAMP3
Vesicle-associated membrane protein 3.
    
 0.420
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats.
    
  0.419
FAM91A1
Protein FAM91A1.
   
 
  0.416
WDR11
WD repeat-containing protein 11.
   
 
  0.415
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.