Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OSBPL11Oxysterol-binding protein; Belongs to the OSBP family. (706 aa)    
Predicted Functional Partners:
VAPB
Vesicle-associated membrane protein-associated protein B.
   
 
 0.759
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
   
   0.738
VAPA
Vesicle-associated membrane protein-associated protein A.
   
 
 0.735
RHOH
Rho-related GTP-binding protein RhoH.
    
 0.583
LARS2
Putative leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.575
PGAM5
Serine/threonine-protein phosphatase PGAM5, mitochondrial.
    
   0.558
NME6
NME/NM23 nucleoside diphosphate kinase 6.
      
 0.546
ARSG
Arylsulfatase G.
      
 0.545
WDR44
WD repeat-containing protein 44.
    
 
 0.539
KLHL25
Kelch-like protein 25.
    
 
 0.531
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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