STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001988Splicing regulator RBM11-like. (166 aa)    
Predicted Functional Partners:
LOC110476133
Serine/Arginine-related protein 53.
    
 
 0.711
ENSLSDP00000008068
annotation not available
   
   0.662
MCM3AP
Germinal-center associated nuclear protein.
   
  
 0.560
RBM17
Splicing factor 45.
      
 0.553
RBM19
Putative RNA-binding protein 19.
      
 0.534
RPS2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.526
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.526
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.526
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.524
RPL5
60S ribosomal protein L5.
    
   0.517
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.