STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTLN_1Centlein. (351 aa)    
Predicted Functional Partners:
LRRC45
Leucine-rich repeat-containing protein 45.
      
 0.628
NIN
Ninein.
      
 0.537
CCP110
UPF0505 protein C16orf62.
      
 0.526
CEP170
Centrosomal protein.
      
 0.526
SAMD4A
Protein Smaug 1.
      
 0.518
ASCC3
Activating signal cointegrator 1 complex subunit 3.
      
 0.511
CEP44
Centrosomal protein.
      
 0.463
WDR5
WD repeat-containing protein 5.
      
 0.454
SASS6
Spindle assembly abnormal protein 6.
      
 0.453
CEP290
Centrosomal protein.
      
 0.448
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.