STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA5Importin subunit alpha; Belongs to the importin alpha family. (539 aa)    
Predicted Functional Partners:
KPNA2
Importin subunit alpha; Belongs to the importin alpha family.
  
 
0.914
KPNB1
Importin subunit beta-1.
   
 0.904
KPNA6
Importin subunit alpha; Belongs to the importin alpha family.
  
  
 
0.900
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 
 0.698
CSE1L
Exportin-2.
   
 
 0.683
RCC1
Regulator of chromosome condensation.
   
 
 0.639
NUP153
Nuclear pore complex protein Nup153.
   
 
 0.623
NCBP1
Nuclear cap-binding protein subunit 1.
   
 
 0.623
RPGR
X-linked retinitis pigmentosa GTPase regulator.
   
 
 0.622
YARS1
Tyrosine--tRNA ligase.
   
  
 0.620
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.