Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000002004annotation not available (91 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.728
KHDRBS1
KH domain-containing, RNA-binding, signal transduction-associated protein 1.
   
   0.718
LOC110475927
KH domain-containing, RNA-binding, signal transduction-associated protein 3.
 
      0.691
FYN
Tyrosine-protein kinase.
    
 0.614
SRMS
Tyrosine-protein kinase.
    
 0.614
FGR
FGR proto-oncogene, Src family tyrosine kinase.
    
 0.614
GRB2
Growth factor receptor-bound protein 2.
    
   0.582
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 
 0.569
DHX9
ATP-dependent RNA helicase A.
   
 
 0.556
RASA1
Ras GTPase-activating protein 1.
    
 
 0.556
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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