STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBOX5RING finger protein 37. (535 aa)    
Predicted Functional Partners:
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
      
 0.949
TRIP12
E3 ubiquitin-protein ligase TRIP12.
   
 0.908
MAVS
Mitochondrial antiviral-signaling protein.
     
 0.874
WDSUB1
WD repeat, SAM and U-box domain-containing protein 1.
      
 0.874
MRPS26
28S ribosomal protein S26, mitochondrial.
      
 0.814
RAD23B
UV excision repair protein RAD23 B.
   
 0.752
UBE2Z
Ubiquitin-conjugating enzyme E2 Z.
   
 0.746
UFD1
Ubiquitin fusion degradation protein 1.
    
 
 0.734
YOD1
Ubiquitin thioesterase OTU1.
    
 
 0.724
MLH1
DNA mismatch repair protein Mlh1.
   
   0.720
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.