STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110477335Presequence protease, mitochondrial-like. (552 aa)    
Predicted Functional Partners:
APP
Amyloid beta A4 protein.
    
 
 0.777
HSPD1
Heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.
   
 
  0.564
FXN
Frataxin, mitochondrial.
     
 0.562
MIPEP
Mitochondrial intermediate peptidase.
    
 
 0.543
APLP2
Amyloid-like protein 2.
    
 
 0.530
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
   0.526
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.518
ATF6
Cyclic AMP-dependent transcription factor ATF-6 alpha.
   
    0.511
DLD
Dihydrolipoyl dehydrogenase.
    
 
 0.511
ATP5MC3
ATP synthase F(0) complex subunit C3, mitochondrial; Belongs to the ATPase C chain family.
   
 
 0.481
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.