STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM162BProtein FAM162B. (144 aa)    
Predicted Functional Partners:
TMEM167A
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.661
USP32
Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family.
      
 0.658
YPEL5
Protein yippee-like; Belongs to the yippee family.
      
 0.633
SCFD1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.610
GPR162
Probable G-protein coupled receptor 162.
    
 
 0.584
GOLGA5
Golgin subfamily A member 5.
      
 0.549
ZPLD1
Zona pellucida-like domain-containing protein 1.
      
 0.527
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.