STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUS1Dehydrodolichyl diphosphate syntase complex subunit Nus1. (282 aa)    
Predicted Functional Partners:
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.999
LOC110477310
Decaprenyl-diphosphate synthase subunit 1-like.
  
 
 0.946
PDSS2
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 
 0.946
PDSS1
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.946
FDPS
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.946
GGPS1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.946
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.944
LOC110469755
Isopentenyl-diphosphate Delta-isomerase 1.
  
 
 0.919
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.912
UBIAD1
UbiA prenyltransferase domain-containing protein 1.
     
 0.883
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (28%) [HD]