STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F1Solute carrier family 35 member F1. (418 aa)    
Predicted Functional Partners:
SDK1
Protein sidekick-1.
      
 0.659
BICC1
Protein bicaudal C 1.
      
 0.657
ZNF516
Zinc finger protein 516.
      
 0.568
FREM1
FRAS1-related extracellular matrix protein 1.
      
 0.537
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
      
 0.536
APOLD1
Apolipoprotein L domain-containing protein 1.
      
 0.524
DCBLD1
Discoidin, CUB and LCCL domain-containing protein 1.
      
 0.514
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.492
SLC35D1
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter.
   
  
 0.484
SLC35C2
Solute carrier family 35 member C2.
      
 0.483
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.