STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR2B5-hydroxytryptamine receptor 2B. (452 aa)    
Predicted Functional Partners:
HTR2A
5-hydroxytryptamine receptor 2A.
  
 
0.965
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.960
HTR2C
5-hydroxytryptamine receptor 2C.
    
0.960
LOC110470681
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.960
GNAS
Guanine nucleotide-binding protein G(S) subunit alpha.
    
 0.599
GNAL
Guanine nucleotide-binding protein G(Olf) subunit alpha.
    
 0.599
BSG
Basigin.
    
 0.576
LUZP1
Leucine zipper protein 1.
      
 0.527
TPH1
Tryptophan 5-hydroxylase 1.
      
 0.524
IGFBP1
Insulin-like growth factor-binding protein 1.
      
 0.516
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.