Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TLR7Toll-like receptor 7. (1044 aa)    
Predicted Functional Partners:
MYD88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 0.995
ENSLSDP00000006407
annotation not available
    
 0.864
UNC93B1
Protein unc-93 B1.
    
 0.864
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.857
EIF4H
Eukaryotic translation initiation factor 4H.
    
   0.744
IL6
Interleukin-6.
   
 
 0.727
CD4
T-cell surface glycoprotein CD4.
   
 0.725
TLR3
Toll-like receptor 3; Belongs to the Toll-like receptor family.
    
 0.715
LY96
Lymphocyte antigen 96.
   
 0.711
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.691
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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