STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEG1Protein HEG 1. (1812 aa)    
Predicted Functional Partners:
KRIT1
Krev interaction trapped protein 1.
    
 
 0.908
MUC1
Mucin-1.
   
 0.689
LOC110484475
Mucin-5B.
   
 0.658
ENSLSDP00000021980
annotation not available
   
 0.658
CCM2
Malcavernin.
   
  
 0.603
GALNT14
Polypeptide N-acetylgalactosaminyltransferase.
    
 0.584
ADGB
Androglobin; Belongs to the peptidase C2 family.
    
 
 0.560
IQCA1
IQ motif containing with AAA domain 1.
   
 0.547
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 
 0.538
INO80D
INO80 complex subunit D.
   
 
 0.532
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.