STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGRPolymeric immunoglobulin receptor. (634 aa)    
Predicted Functional Partners:
JCHAIN
Immunoglobulin J chain.
   
 0.952
ENSLSDP00000001605
LOW QUALITY PROTEIN: immunoglobulin mu heavy chain-like.
    
  0.907
ENSLSDP00000001609
Immunoglobulin heavy chain.
    
  0.907
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
      
 0.589
PIGT
GPI transamidase component PIG-T.
      
 0.571
ENSLSDP00000015650
annotation not available
    
 0.452
TNR
Tenascin-R.
    
 0.452
TNC
Tenascin.
    
 0.452
MIS12
Protein MIS12.
    
   0.416
VPREB3
Pre-B lymphocyte protein 3.
   
 0.413
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.