Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NHSL2NHS-like protein 2. (1112 aa)    
Predicted Functional Partners:
PICK1
PRKCA-binding protein.
    
   0.922
TPT1
Translationally-controlled tumor; Belongs to the TCTP family.
    
   0.922
WASF2
Wiskott-Aldrich syndrome protein family member 2.
    
   0.851
NCK2
Cytoplasmic protein.
    
   0.850
BRK1
Chromosome 3 open reading frame 10.
    
 
 0.849
PIN4
Peptidyl-prolyl cis-trans isomerase.
      
 0.704
SHISAL1
Uncharacterized protein KIAA1644.
      
 0.695
ABI1
Abl interactor 1.
    
 
 0.689
ADGRG3
Adhesion G protein-coupled receptor G3.
      
 0.686
WASF1
Wiskott-Aldrich syndrome protein family member 1.
    
   0.624
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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