STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC80Protein unc-80. (3264 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79.
   
 0.984
NALCN
Sodium leak channel non-selective protein.
   
 0.984
SLIT2
Slit 2 protein.
    
 0.685
ROBO2
Roundabout 2.
      
 0.672
FAM155B
Transmembrane protein FAM155B.
    
 
 0.672
FAM155A
Transmembrane protein FAM155A.
    
 
 0.672
ENSLSDP00000024938
annotation not available
    
 
 0.672
GK5
Putative glycerol kinase 5; Belongs to the FGGY kinase family.
    
 
 0.546
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 0.524
SH3GL2
Endophilin-A1.
     
 0.515
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.