Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000002186annotation not available (69 aa)    
Predicted Functional Partners:
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.953
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.951
TAF11
Transcription initiation factor TFIID subunit 11.
    
 0.948
TAF8
Transcription initiation factor TFIID subunit 8.
    
 0.947
TAF2
Transcription initiation factor TFIID subunit 2.
    
 0.926
TAF3
Transcription initiation factor TFIID subunit 3.
    
 0.924
LOC110474354
Transcription initiation factor TFIID subunit 9.
    
 0.920
TAF7
Transcription initiation factor TFIID subunit 7.
    
 0.917
TAF1
Transcription initiation factor TFIID subunit.
    
 0.903
TAF13
Transcription initiation factor TFIID subunit 13.
    
 0.896
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.