Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASSF5Ras association domain-containing protein 5. (260 aa)    
Predicted Functional Partners:
MDM2
E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family.
   
 0.927
NRAS
GTPase NRas.
    
 0.919
KRAS
GTPase KRas.
    
 0.919
HRAS
GTPase HRas.
    
 0.919
MRAS
Ras-related protein M-Ras.
    
  0.906
RRAS2
Ras-related protein R-Ras2.
    
  0.906
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.901
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.901
HIPK1
Homeodomain-interacting protein kinase 1.
    
 0.901
HIPK3
Homeodomain-interacting protein kinase 3.
    
 0.901
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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